https://bugs.gentoo.org/874477 --- a/eufind_main.c +++ b/eufind_main.c @@ -23,4 +23,5 @@ #include #include +#include #include "squid.h" #include "sqfuncs.h" @@ -47,4 +48,14 @@ -i : start nucleotide numbering at (def=1)\n\n"; +int GetBbox(float*, int*, char*, int, int, int); +int GetBestABox(TRNA_TYPE*, char*, char*, int, int, int, int, int); +int GetBestTrxTerm(TRNA_TYPE*, char*, int, float); +int GetSecABox(TRNA_TYPE*, char*); +void Get_tRNA_stats(TRNA_TYPE*, char*, int, int); +int Init_tRNA(TRNA_TYPE*); +int IntEncodeSeq(char*, char*, int); +void Save_tRNA(TRNA_TYPE*, SQINFO*, char*, int, int, long int); +int tRNAOverlap(TRNA_TYPE*, TRNA_TYPE*, int); + int main (int argc, char **argv) --- a/scan_main.c +++ b/scan_main.c @@ -8,4 +8,5 @@ #include #include +#include #include #include --- a/score_main.c +++ b/score_main.c @@ -10,4 +10,5 @@ #include #include +#include #include #include --- a/trnascan.c +++ b/trnascan.c @@ -69,4 +69,5 @@ #include #include +#include #include @@ -333,5 +334,5 @@ ); -main(int argc, char **argv) +int main(int argc, char **argv) { /* pointers to the different files fpi=input file, fpo=output file, @@ -1419,5 +1420,5 @@ /* Calls to this function eliminated for efficiency T. Lowe 11/95 */ -myindex (char *s, char *t) +int myindex (char *s, char *t) { int i, j, k;